refactor: group managed configuration under config

[jiminu]

Summary

• move managed payloads into config/shared, config/macos, and config/ubuntu
• update installer, release, dependency automation, CI, documentation, and tests to use the new source paths
• retain all installed user-home paths and CLI behavior

Validation

GitHub Actions CI:

• Shell checks: Ubuntu / macOS
• Ubuntu 24.04 installation E2E
• macOS configuration lifecycle E2E
• Pinned Neovim developer E2E
• Repository test suite, including release payload/config layout coverage

[Copilot]

🔵 Needs a closer look

config/shared/zsh/update-notice.zsh contains a logic bug where _selfishell_version_is_valid can incorrectly return non-zero for valid prerelease versions due to a missing final return 0.

Pull request overview

This PR refactors Selfishell’s managed configuration layout by consolidating platform and shared payloads under config/ (config/shared, config/macos, config/ubuntu), and updates the installer, tooling, CI, documentation, and tests to reference the new source paths while keeping installed home-directory paths and CLI behavior stable.

Changes:

• Moved managed configuration payloads into config/shared, config/macos, and config/ubuntu and updated release packaging to ship the new layout.
• Updated installer/resource declarations plus dependency automation and CI change classification to use the new config roots.
• Updated tests and docs to reflect new configuration source paths and added release-archive assertions.

File summaries

File	Description
tests/tool_status_test.bash	Updates mise config-path fixtures and expectations to config/shared/mise.toml.
tests/release_bootstrap_test.bash	Adds archive content assertions for the new config/ payload root.
tests/profiles_test.bash	Updates mise pin source path to config/shared/mise.toml.
tests/neovim_config_test.bash	Updates Neovim config discovery paths to config/shared/nvim/....
tests/managed_install_test.bash	Updates managed-resource installation assertions for new config/ source paths.
tests/installers_test.bash	Updates mise config path expectations to config/shared/mise.toml.
tests/history_test.bash	Updates history module source path to config/shared/zsh/history.zsh.
tests/dependency_updates_test.bash	Updates dependency-updater fixtures and assertions for new config locations.
tests/common_zsh_test.bash	Updates test harness paths/vars to source shared Zsh modules under config/shared/zsh.
tests/ci_change_classification_test.bash	Updates classification repo fixtures to treat config/shared/nvim as runtime-affecting.
tests/benchmark_test.bash	Updates benchmark fixture mutation path for aliases.zsh under config/shared/zsh.
scripts/update-dependencies.sh	Retargets updater staging to config/shared/{mise.toml,zsh/*.zsh}.
scripts/classify-ci-changes.sh	Updates runtime-change detection to config/shared/nvim/*.
scripts/check.sh	Updates lint/syntax file discovery to include config/**.zsh and platform zshrc files.
scripts/build-release.sh	Packages config/ (instead of legacy roots) into release payloads.
scripts/benchmark.sh	Updates benchmark wiring to use config/shared/zsh/* and new platform zshrc paths.
lib/tool_status.sh	Reads approved mise versions from config/shared/mise.toml.
lib/resources.sh	Updates managed resource source paths to the new config/ tree.
lib/installers.sh	Updates mise invocation to use config/shared/mise.toml for installs/exec/which.
lib/commands/install.sh	Updates platform zshrc sources to config/{macos,ubuntu}/zshrc.
docs/UPDATES.md	Updates mise pin source-of-truth reference to config/shared/mise.toml.
docs/SECURITY.md	Updates mise selector review location to config/shared/mise.toml.
docs/PROFILES.md	Updates docs to reference config/shared/mise.toml for default tool versions.
config/ubuntu/zshrc	Introduces Ubuntu/WSL managed zshrc sourcing shared common.zsh.
config/shared/zsh/update-notice.zsh	Adds update notice + version comparison + locking implementation under shared config.
config/shared/zsh/runtime.zsh	Adds shared runtime module enabling mise activation.
config/shared/zsh/interactive.zsh	Adds shared interactive module (aliases, caches, plugins, prompt init).
config/shared/zsh/history.zsh	Adds shared history defaults module.
config/shared/zsh/completion.zsh	Adds shared completion module (compinit strategy, kubectl/aws completion, zinit integration).
config/shared/zsh/common.zsh	Adds shared entrypoint wiring module ordering and shared helpers.
config/shared/zsh/aliases.zsh	Adds shared alias definitions with presence checks.
config/shared/vimrc	Adds managed Vim defaults under shared config.
config/shared/starship.toml	Adds managed Starship configuration under shared config.
config/shared/nvim/lua/plugins/ui.lua	Adds Neovim UI plugin specs under new managed config root.
config/shared/nvim/lua/plugins/lsp.lua	Adds Neovim LSP/Mason plugin specs under new managed config root.
config/shared/nvim/lua/plugins/editor.lua	Adds Neovim editor/plugin specs under new managed config root.
config/shared/nvim/lua/plugins/completion.lua	Adds Neovim completion/cmp specs under new managed config root.
config/shared/nvim/lua/config/plugin_versions.lua	Adds manifest-based plugin pin enforcement helper.
config/shared/nvim/lua/config/options.lua	Adds Neovim options defaults under new managed config root.
config/shared/nvim/lua/config/lazy.lua	Adds lazy.nvim bootstrap + revision enforcement under managed config.
config/shared/nvim/lua/config/languages.lua	Adds default LSP server list for Mason setup.
config/shared/nvim/lua/config/keymaps.lua	Adds Neovim keymaps module under managed config.
config/shared/nvim/lua/config/autocmds.lua	Adds Neovim autocmds (treesitter parser install, resize, cursor restore).
config/shared/nvim/init.lua	Adds managed Neovim init.lua entrypoint.
config/shared/nvim/after/lsp/lua_ls.lua	Adds lua_ls LSP settings.
config/shared/mise.toml	Adds shared mise tool version pins under new config root.
config/macos/zshrc	Introduces macOS managed zshrc sourcing shared common.zsh + Homebrew PATH setup.
config/macos/ghostty/config.ghostty	Moves Ghostty managed config under config/macos/ghostty/.
AGENTS.md	Updates repository map and mise pin source-of-truth path references.
.github/workflows/dependency-updates.yml	Updates tracked files list/exclusions for dependency automation to new config paths.
.github/workflows/ci.yml	Updates CI’s mise version read to config/shared/mise.toml.

Review details

• Files reviewed: 26/51 changed files
• Comments generated: 0
• Review effort level: Lite

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