RasmussenLab
The Rasmussen group focuses on proteome and genome variation, coding variation and deep learning for integration of genomics, proteomics and clinical data.
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taxconverter
taxconverter PublicUnifies the presentation of taxonomic classifiers output
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Showing 10 of 42 repositories
- SLIM Public
SLIM is a small bilinear model that uses gene embeddings (e.g. STRING) to predict single-cell genetic perturbation responses.
- MOVE Public
MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
- VAEs_for_biomedical_data_integration Public
This is the repository for the paper "On the use of VAEs for biomedical data integration".
- TaxVamb-Benchmarks Public
Snakemake workflow for evaluating MAG binning tools with CheckM2 and GUNC quality assessment for the TaxVamb paper
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