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Pull requests: MannLabs/alphapepttools

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Pull requests list

[fix] Adapt to new mudata convention
#267 opened Aug 6, 2026 by lucas-diedrich Collaborator Loading…
2
Rename pca adata arg breaking-change Breaking change that changes the API
#265 opened Jul 27, 2026 by mschwoer Contributor Loading…
Update template to v0.8.0
#255 opened Jul 17, 2026 by scverse-bot Loading…
Avoid eager package imports
#254 opened Jul 16, 2026 by pjhartout Loading…
9
harmonized markdown in study 04 (scDVP)
#253 opened Jul 10, 2026 by shanibmo Collaborator Loading…
11
add full alphadia PSM report for Bader et al. study
#252 opened Jul 9, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
Harmonize & expand study 02
#251 opened Jul 7, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
1
first pass for study 03 harmonization to common study layout
#250 opened Jul 6, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
renumber headers in study notebook 04
#249 opened Jul 6, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
1
Harmonize study 01
#248 opened Jul 6, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
2
more detailed/up to date challenges description in the PELSA notebook
#247 opened Jul 6, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
Custom limits to MappedColormaps
#246 opened Jul 4, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
5
resolve all ty diagnostics while keeping invalid-argument-type active
#243 opened Jun 30, 2026 by mschwoer Contributor Loading…
9
add functionality for count-based completeness filtering breaking-change Breaking change that changes the API enhancement New feature or request
#242 opened Jun 29, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
2
Expanded ebayes ttest breaking-change Breaking change that changes the API enhancement New feature or request
#240 opened Jun 26, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
12
Type hints
#239 opened Jun 26, 2026 by mschwoer Contributor Loading…
12
pl test expansion
#236 opened Jun 19, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
tl test expansion
#235 opened Jun 19, 2026 by vbrennsteiner Collaborator Loading…
1
io test expansion
#234 opened Jun 19, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
data test expansion
#233 opened Jun 19, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
1
pp test expansion
#232 opened Jun 19, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
10
expose AxisManager in pl init
#223 opened May 24, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
3
Find protease sites enhancement New feature or request
#178 opened Feb 17, 2026 by vbrennsteiner Collaborator Loading…
@vbrennsteiner
5
Provide note to users for too many missing values in imputation
#145 opened Jan 12, 2026 by vbrennsteiner Collaborator • Draft
1 task
@vbrennsteiner
2
ProTip! Adding no:label will show everything without a label.