PR: Wire report notebooks into pipeline - #93

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KevinMLanderos wants to merge 4 commits into

v2from

Commits on Jul 21, 2026

Wire report notebooks into pipeline and fix real render bugs
KevinMLanderos
committed
6bcad74

Commits on Jul 22, 2026

- Add timepoint_order column to the minimal-example samplesheet (1=Base,
KevinMLanderos
committed
3b8621e
Removed unnecessary commented code
KevinMLanderos
committed
6f9410d
Add missing template_patient_clustering_on/off.qmd notebooks

KevinMLanderos
and
claude
committed
78bb82f