Skip to content

EVA-4204: Update OLS search to exact=false and update tests#508

Merged
apriltuesday merged 1 commit into
EBIvariation:masterfrom
apriltuesday:fix-integration-tests
Jul 6, 2026
Merged

EVA-4204: Update OLS search to exact=false and update tests#508
apriltuesday merged 1 commit into
EBIvariation:masterfrom
apriltuesday:fix-integration-tests

Conversation

@apriltuesday

@apriltuesday apriltuesday commented Jun 29, 2026

Copy link
Copy Markdown
Contributor

Exact OLS search is now case sensitive (EBISPOT/ols4#1309), which means it rarely returns results as we always lowercase trait names and in general can't predict the casing of ontology labels and synonyms.

Switching to inexact search, as in this PR, doesn't affect automated results, but there are more curation candidates including some that seem unrelated (EBISPOT/ols4#1308). See the test spreadsheet.

@apriltuesday apriltuesday self-assigned this Jul 6, 2026
@apriltuesday apriltuesday requested a review from tcezard July 6, 2026 10:27
@apriltuesday apriltuesday merged commit 9a3f7f3 into EBIvariation:master Jul 6, 2026
2 checks passed
@apriltuesday apriltuesday deleted the fix-integration-tests branch July 6, 2026 15:45
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants