diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index e7af82c..934e8de 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -15,7 +15,11 @@ jobs: - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5 with: - python-version: "3.12" + # The DECLARED FLOOR, not a convenient version. CI must exercise the + # weakest supported config, because that is the one nobody runs + # locally. Keep equal to requires-python — test_ci_gates.py asserts + # it. The other end (3.13) is covered by test-py313 below. + python-version: "3.11" - name: Install uv uses: astral-sh/setup-uv@38f3f104447c67c051c4a08e39b64a148898af3a # v4 — pinned, NOT upgraded @@ -33,7 +37,11 @@ jobs: - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5 with: - python-version: "3.12" + # The DECLARED FLOOR, not a convenient version. CI must exercise the + # weakest supported config, because that is the one nobody runs + # locally. Keep equal to requires-python — test_ci_gates.py asserts + # it. The other end (3.13) is covered by test-py313 below. + python-version: "3.11" - name: Install uv uses: astral-sh/setup-uv@38f3f104447c67c051c4a08e39b64a148898af3a # v4 — pinned, NOT upgraded @@ -51,7 +59,11 @@ jobs: - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5 with: - python-version: "3.12" + # The DECLARED FLOOR, not a convenient version. CI must exercise the + # weakest supported config, because that is the one nobody runs + # locally. Keep equal to requires-python — test_ci_gates.py asserts + # it. The other end (3.13) is covered by test-py313 below. + python-version: "3.11" - name: Install uv uses: astral-sh/setup-uv@38f3f104447c67c051c4a08e39b64a148898af3a # v4 — pinned, NOT upgraded @@ -76,9 +88,64 @@ jobs: - name: Install dependencies run: uv sync + - name: The interpreter is the declared floor + # An assertion, not an echo. That setup-python's 3.11 is the + # interpreter `uv run` then selects is an inference about how two + # actions interact via PATH — true today, unobserved until now. + # An echo would print the answer into a log nobody reads; this + # fails the job. (C-336: claims inferred rather than observed.) + run: uv run python -c "import sys; assert sys.version_info[:2] == (3, 11), sys.version" + - name: Test run: uv run pytest + test-py313: + # The OTHER end of the supported range, and the reason it is a separate + # job rather than a matrix leg: branch protection requires the status + # check named exactly `test`, with enforce_admins. A strategy.matrix + # renames it to `test (3.11)`, the required `test` never reports, and + # every PR waits forever. New job names are safe precisely because they + # are NOT required. + # + # What it buys: since the floor dropped to 3.11 (#443) the lock forks — + # 3.11 resolves tifffile 2026.3.3 / imagecodecs 2026.3.6, >=3.12 keeps + # 2026.5.15 / 2026.5.10. The required `test` job therefore exercises the + # OLD raster line while the dev venv and the server run the new one. + # This job is the only thing that runs the production line. It is not + # required yet — a required check that has never reported blocks every + # merge — so the follow-up in C-347 is to add it to both branches' + # required lists once it has reported. Until then it is visible, not + # enforced, and that gap is registered rather than glossed. + # + # Full suite, not raster-only: the fork is a property of the resolver, + # so the next upstream to drop 3.11 adds a package a raster-scoped job + # would silently miss. + runs-on: ubuntu-latest + steps: + - uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4 + + - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5 + with: + python-version: "3.13" + + - name: Install uv + uses: astral-sh/setup-uv@38f3f104447c67c051c4a08e39b64a148898af3a # v4 — pinned, NOT upgraded + + - name: Install dependencies + # --frozen: this job must not be able to repair a stale lock, or it + # would mask exactly what `uv lock --check` in `test` exists to catch. + run: uv sync --frozen + + - name: The interpreter is not the floor + # --frozen on EVERY uv run, not just the sync. `uv run` locks and syncs + # by default, so a bare `uv run` here would re-resolve and rewrite a + # stale lock — undoing the --frozen above and masking exactly what + # `uv lock --check` in `test` exists to catch. + run: uv run --frozen python -c "import sys; assert sys.version_info[:2] == (3, 13), sys.version" + + - name: Test + run: uv run --frozen pytest + docs: # Documentation consistency. The script has existed since the base-docs # set was created and ran NOWHERE — not CI, not pytest — so it only ever @@ -107,7 +174,11 @@ jobs: - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5 with: - python-version: "3.12" + # The DECLARED FLOOR, not a convenient version. CI must exercise the + # weakest supported config, because that is the one nobody runs + # locally. Keep equal to requires-python — test_ci_gates.py asserts + # it. The other end (3.13) is covered by test-py313 below. + python-version: "3.11" - name: Install uv uses: astral-sh/setup-uv@38f3f104447c67c051c4a08e39b64a148898af3a # v4 — pinned, NOT upgraded diff --git a/.github/workflows/publish_package.yml b/.github/workflows/publish_package.yml index c8547f6..38431b2 100644 --- a/.github/workflows/publish_package.yml +++ b/.github/workflows/publish_package.yml @@ -29,10 +29,10 @@ jobs: steps: - uses: actions/checkout@11d5960a326750d5838078e36cf38b85af677262 # v4 - - name: Install uv (+ Python 3.12) + - name: Install uv (+ Python 3.11) uses: astral-sh/setup-uv@d4b2f3b6ecc6e67c4457f6d3e41ec42d3d0fcb86 # v5 with: - python-version: "3.12" # requires-python is >=3.12; the wheel is pure-Python (py3-none-any) + python-version: "3.11" # requires-python is >=3.11; the wheel is pure-Python (py3-none-any) - name: Guard — pyproject version must equal the tag being released # #363 / C-346. The guard below checks the version BEATS PyPI. It does @@ -52,12 +52,12 @@ jobs: TAG: ${{ github.ref_name }} run: | set -euo pipefail - # `uv run --no-project --python 3.12`, matching the guard below. + # `uv run --no-project --python 3.11`, matching the guard below. # Bare `python3` is whatever the runner image ships, and tomllib # needs >= 3.11 — drilled locally on python3.10, where the bare # form died with ModuleNotFoundError. Pinning the interpreter is # the difference between a guard and a guard that works. - VERSION=$(uv run --no-project --python 3.12 python -c "import tomllib;print(tomllib.load(open('pyproject.toml','rb'))['project']['version'])") + VERSION=$(uv run --no-project --python 3.11 python -c "import tomllib;print(tomllib.load(open('pyproject.toml','rb'))['project']['version'])") if [ "$TAG" != "v${VERSION}" ]; then echo "::error::Tag/version mismatch — refusing to publish." echo " tag that triggered this run : ${TAG}" @@ -71,7 +71,7 @@ jobs: - name: Guard — pyproject version must be newer than what's on PyPI run: | - uv run --no-project --python 3.12 --with packaging python - <<'PY' + uv run --no-project --python 3.11 --with packaging python - <<'PY' import json, tomllib, urllib.request from packaging.version import parse new = tomllib.load(open("pyproject.toml", "rb"))["project"]["version"] diff --git a/.github/workflows/release-topology.yml b/.github/workflows/release-topology.yml index 59b981a..a22c54a 100644 --- a/.github/workflows/release-topology.yml +++ b/.github/workflows/release-topology.yml @@ -96,6 +96,17 @@ jobs: echo "main is NOT an ancestor of development." fi + - uses: actions/setup-python@a26af69be951a213d495a4c3e4e4022e16d87065 # v5 + with: + # This workflow had NO interpreter pin — it ran `uv sync` and took + # whatever uv chose. That was tolerable while requires-python was + # >=3.12 and narrow; since #443 widened it to >=3.11 the unpinned + # choice also selects which raster fork installs. These gates touch + # no rasters, so the impact is nil today — pinned anyway, because + # "nil today" is how the deployment guide's Python line survived + # three months of being wrong. + python-version: "3.11" + - name: Install uv uses: astral-sh/setup-uv@38f3f104447c67c051c4a08e39b64a148898af3a # v4 — pinned, NOT upgraded diff --git a/docs/ADRs/030_raster_tooling.md b/docs/ADRs/030_raster_tooling.md index 50632a6..09adadf 100644 --- a/docs/ADRs/030_raster_tooling.md +++ b/docs/ADRs/030_raster_tooling.md @@ -4,6 +4,7 @@ **Date:** 2026-05-18 **Deciders:** Simon Polichinel von der Maase, Claude Code **Applies:** ADR-029 (GHS-POP as First Population Source), ADR-012 (Four-Layer Data Architecture) +**Amended:** 2026-08-13 — the Python floor is now `>=3.11`. The tooling decision is unchanged; see the Amendment at the end of Consequences. *(A header pointer is an extension of ADR-051's inline-amendment convention, added because this ADR is long and its floor claim appears in five places — a reader who stops after "In scope" would otherwise leave with a fact that is no longer true.)* --- @@ -159,6 +160,79 @@ Write the Rust raster processing tool immediately for GHS-POP, skip the tifffile - **tifffile doesn't parse GeoTIFF CRS metadata as first-class objects.** We validate CRS by reading raw TIFF GeoKey tags rather than through a geospatial API. This is adequate for WGS84 validation but less ergonomic than rasterio. - **Python ≥3.12 version bump required.** Current tifffile releases require Python 3.12+. This is assessed as safe for this repository (no 3.10-specific patterns in codebase, all dependencies have 3.12-compatible versions) but requires bumping dependency lower bounds (numpy ≥1.26, pandas ≥2.0, matplotlib ≥3.8). +> ### Amendment, 2026-08-13 — the floor drops to 3.11, and what that costs +> +> **The tooling decision is untouched.** tifffile now, Rust long-term, no GDAL, `read_geotiff` as +> the single reader — all of it stands. Only the version consequence above is amended. Recorded +> rather than rewritten, per ADR-051. +> +> **What changed.** `requires-python` is now `">=3.11"` (#443). +> +> **Why the original reason did not survive contact.** The bullet above is the whole argument, and +> it is a fact about a vendor at a moment — *"current tifffile releases require Python 3.12+"* — +> not an architectural requirement. It was true when written. What we did not notice is that it +> made a third party's release schedule into our public API. **3.11 was never considered:** the +> string does not appear anywhere in this ADR, and there is no Considered Alternative about +> interpreter versions. The bullet's own supporting evidence assesses the wrong thing — *"no +> 3.10-specific patterns in codebase"* says nothing about 3.11 or 3.12. +> +> **The consumer that forced the question.** The views-models conda environments run 3.11.14 and +> 3.11.15, and 28 requirements files there reference this package, so `pip install +> views-datafactory` failed in every one of them. This is named deliberately: without a concrete +> consumer, the right action would have been to leave the floor alone and merely record that it +> had been inherited rather than chosen. +> +> **Verified before deciding, not after.** Full suite green on 3.11.13 with the same six +> pre-existing xfails; `ruff` at `py311`, `mypy src/`, and `compileall` all clean; and a search for +> the constructs that would actually require 3.12 — PEP 695 type parameters, `itertools.batched`, +> `typing.override`, `Path.walk`, `sys.monitoring` — found none. +> +> **The cost, which is real and permanent.** `uv.lock` is now multi-version. Under 3.11 the raster +> stack resolves `tifffile 2026.3.3` and `imagecodecs 2026.3.6`; under ≥3.12 it keeps `2026.5.15` +> and `2026.5.10`. Both upstreams dropped 3.11 deliberately and neither will restore it: tifffile +> adopted PEP 695 syntax at 2026.4.11, so newer releases would raise `SyntaxError` on 3.11 rather +> than merely warn, and imagecodecs ships `cp312-abi3` wheels only from 2026.5.10. A 3.11 consumer +> is therefore pinned to the March-2026 raster line for good. +> +> **Which decoder decodes production pixels — and the gap this exposed.** §Consequences above says +> `imagecodecs` covers "exotic compression" and calls it "unlikely for a population grid". That is +> wrong, and was corrected in code one day after this ADR was accepted without the ADR being +> updated. Every GHS-POP and GHS-BUILT-S GeoTIFF JRC publishes is LZW-compressed, and tifffile has +> no pure-Python LZW path: `read_geotiff`'s `page.asarray()` dispatches to `imagecodecs.lzw_decode` +> unconditionally. Blocking the import and attempting an LZW write raises +> `KeyError: " requires the 'imagecodecs' package"` — measured, not inferred. +> +> `imagecodecs` is imported by **nothing** under `src/`. So it is load-bearing and invisible: an +> import-graph audit concludes it is removable, and removing it would break every production raster +> read while leaving the suite green. **Until #443, no test in this repository had ever written a +> compressed TIFF on any interpreter** — every `imwrite` was uncompressed, so neither decoder line +> had been exercised. That hole predates this change by three months; the change only made it +> visible, because for the first time there are two candidate decoders and a reason to ask which +> one was tested. +> +> **What is still not verified.** Nothing compares the two decoder lines' *output*. We now assert +> that each can decode LZW; we do not assert they produce identical pixels. Do not read the new +> test as parity evidence. +> +> **CI consequence.** The required `test` check runs the floor, so it exercises the *old* raster +> line, while the dev venv and the server run the new one. A non-required `test-py313` job covers +> the production line. A check nobody must satisfy is ignorable, and that residual is registered as +> **C-347** with the follow-up that closes it: make `test-py313` required on both branches once it +> has reported. A `strategy.matrix` is not available here — it renames the required `test` context +> and deadlocks every pull request under `enforce_admins`. +> +> **Open Question 4 is answered and replaced.** "Python 3.12 availability on the production server" +> was the wrong question. The right one is *which interpreter does the server run, and therefore +> which raster line does it install* — and nothing in this repository asserts it. Registered as +> **C-348**. +> +> **One instance of a class, worth naming.** `hetzner_deployment_guide.md` said "Install Python +> 3.10+" for the entire three months this ADR mandated `>=3.12` — an instruction that produced an +> environment where the package could not be installed at all. Neither document was wrong on its +> own terms; they were never compared. Fixed in #443, and `tests/test_ci_gates.py` now asserts that +> CI's interpreter pins equal the declared floor, so at least that pair can no longer drift +> silently. + --- ## Implementation Notes @@ -166,6 +240,10 @@ Write the Rust raster processing tool immediately for GHS-POP, skip the tifffile ### Immediate (GHS-POP integration) 1. Bump `requires-python` to `">=3.12"` in `pyproject.toml`. Adjust dependency lower bounds as needed. + > **Superseded by the Amendment above — do not follow this step.** The floor is `>=3.11`. + > Re-raising it here would re-break the views-models 3.11 environments. Left in place rather + > than edited, per this repo's amend-don't-rewrite convention, but flagged inline because an + > implementer reading only §Implementation Notes would otherwise reverse #443. 2. Add `tifffile` to dependencies. 3. Verify `uv run pytest` passes after dependency changes. 4. GeoTIFF reading pattern: `tifffile.imread(path)` returns numpy array. Validate dimensions (21600×43200 for 30ss global), check GeoKey tags for EPSG:4326, replace nodata (-9999) with 0. @@ -211,6 +289,9 @@ Write the Rust raster processing tool immediately for GHS-POP, skip the tifffile 2. **Infrastructure data landscape.** The format survey covered likely sources but infrastructure data has not been broadly surveyed. An unusual infrastructure dataset could change the tooling calculus. 3. **tifffile compression support.** GHS-POP GeoTIFFs are compressed (likely LZW or DEFLATE). tifffile handles these, but the specific compression used by JRC should be verified on first download. 4. **Python 3.12 on production server.** The Hetzner server currently runs the pipeline. Python 3.12 availability needs to be confirmed before deployment. + > **Answered and replaced by the Amendment above.** The floor is `>=3.11`, so availability is no + > longer the question — *which* interpreter the server has is, because it now selects the raster + > decoder. Nothing in this repository asserts it; tracked as **C-348**. --- diff --git a/docs/guides/hetzner_deployment_guide.md b/docs/guides/hetzner_deployment_guide.md index e08823e..6cd8a91 100644 --- a/docs/guides/hetzner_deployment_guide.md +++ b/docs/guides/hetzner_deployment_guide.md @@ -118,14 +118,36 @@ sudo apt update && sudo apt upgrade -y ### 1.3 Install Python and uv ```bash -# Install Python 3.10+ -sudo apt install -y python3 python3-pip git +# Install git; get Python from uv, NOT from apt (see the note below) +sudo apt install -y git # Install uv (fast Python package manager) curl -LsSf https://astral.sh/uv/install.sh | sh source ~/.cargo/env # or restart shell + +# Pin the interpreter EXPLICITLY. Do not rely on `apt install python3`. +uv python install 3.13 ``` +> **Why the interpreter is named here, and why `apt install python3` is not enough.** +> +> This block used to read `# Install Python 3.10+`. For three months the project +> declared `requires-python = ">=3.12"`, so anyone following that instruction on a +> distro shipping 3.10 or 3.11 built an environment in which this package could not +> be installed at all. Nothing detected it; the guide and `pyproject.toml` were each +> internally consistent and never compared. +> +> Since #443 the floor is `>=3.11`, so bare `apt install python3` no longer *fails* — +> which is worse, because the version it happens to give you now **selects which raster +> decoder the server runs**. On 3.11, `uv sync` resolves `tifffile 2026.3.3` and +> `imagecodecs 2026.3.6`; on 3.12+ it resolves the current line. Those are the codecs +> that decode every GHS-POP and GHS-BUILT-S pixel. A distro default silently choosing +> between them is not a deployment decision anyone made. +> +> Name the version, and keep it equal to what CI's non-floor job exercises. Nothing in +> this repository asserts which interpreter the server actually has — that gap is +> registered as **C-348**. + ### 1.4 Clone the repository ```bash @@ -1146,7 +1168,7 @@ su - views-deploy -c "sudo ls /" # Expected: permission denied (not in sudo group) # 7. Automated verification (run on server) -python3 scripts/verify_server_hardening.py +uv run python scripts/verify_server_hardening.py # Expected: all checks pass ``` @@ -1277,7 +1299,7 @@ rm /root/.ssh/id_ed25519 /root/.ssh/id_ed25519.pub #### Verification ```bash -python3 /home/views-deploy/views-datafactory/scripts/verify_server_hardening.py +uv run --directory /home/views-deploy/views-datafactory python scripts/verify_server_hardening.py # Expected: 21/21 checks pass # Check 20: "Personal SSH key removed from /root — removed" # Check 21: "Deploy key exists for service user" @@ -1458,7 +1480,7 @@ ssh @204.168.219.108 "sudo passwd -S " Or run the automated check: ```bash -python3 /home/views-deploy/views-datafactory/scripts/verify_server_hardening.py +uv run --directory /home/views-deploy/views-datafactory python scripts/verify_server_hardening.py # Looks for named accounts with sudo, verifies each has a password # and an authorized_keys file. ``` diff --git a/docs/guides/publishing_to_pypi.md b/docs/guides/publishing_to_pypi.md index ffd409b..6398457 100644 --- a/docs/guides/publishing_to_pypi.md +++ b/docs/guides/publishing_to_pypi.md @@ -199,7 +199,7 @@ uvx --from twine twine check dist/* # both files must say PASSED uv publish --publish-url https://test.pypi.org/legacy/ dist/* # clean-room install back (TestPyPI for this pkg, real PyPI for the dependencies) -uv venv --clear --python 3.12 /tmp/tp-check && source /tmp/tp-check/bin/activate +uv venv --clear --python 3.11 /tmp/tp-check && source /tmp/tp-check/bin/activate uv pip install --index-url https://test.pypi.org/simple/ \ --extra-index-url https://pypi.org/simple/ views-datafactory python -c "from datafactory_query import load_dataset, CONTRACT_VERSION; print('OK', CONTRACT_VERSION)" @@ -330,6 +330,6 @@ eleven stale branches had accumulated before that was switched on. - This guide and `.github/workflows/publish_package.yml` mirror the views-frames routine (`views-frames/docs/guides/publishing-to-pypi.md`), adapted: Python floor - 3.12, nine bundled packages, and the code-only wheel/sdist guarantee. + 3.11, nine bundled packages, and the code-only wheel/sdist guarantee. - First exercised by the `v1.9.0` release (2026-07) — the first PyPI publish of this project. diff --git a/pyproject.toml b/pyproject.toml index 2664b24..ecc430c 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -8,7 +8,17 @@ authors = [ readme = "README.md" license = "MIT" license-files = ["LICENSE"] -requires-python = ">=3.12" +# Lowered 3.12 -> 3.11 on 2026-08-13 (#443). ADR-030 set >=3.12 because +# "tifffile's current releases require it" — a fact about a vendor at a +# moment, not an architectural need; 3.11 was never considered there. +# The consumer that forced the question: the views-models conda envs run +# 3.11.14/3.11.15, so 28 requirements files could not install this at all. +# COST, and it is real: the lock now forks. Under 3.11 the raster stack +# resolves tifffile 2026.3.3 / imagecodecs 2026.3.6; under >=3.12 it stays +# 2026.5.15 / 2026.5.10. Both upstreams dropped 3.11 permanently (tifffile +# uses PEP 695 from 2026.4.11 and would SyntaxError; imagecodecs ships +# cp312-abi3 only from 2026.5.10). See the ADR-030 amendment and C-347. +requires-python = ">=3.11" keywords = ["conflict-forecasting", "priogrid", "ucdp", "acled", "data-pipeline", "provenance", "zarr"] # License is declared via the SPDX `license` expression above (PEP 639); the deprecated # `License ::` classifier is intentionally omitted to avoid the expression/classifier clash. @@ -17,6 +27,7 @@ classifiers = [ "Intended Audience :: Science/Research", "Operating System :: OS Independent", "Programming Language :: Python :: 3", + "Programming Language :: Python :: 3.11", "Programming Language :: Python :: 3.12", "Programming Language :: Python :: 3.13", "Topic :: Scientific/Engineering", @@ -142,7 +153,7 @@ include = ["/src"] [tool.ruff] line-length = 88 -target-version = "py312" +target-version = "py311" [tool.ruff.lint] select = ["E", "F", "I", "N", "UP", "B", "A", "C4", "SIM"] @@ -151,10 +162,33 @@ ignore = ["UP046"] [tool.mypy] strict = true ignore_missing_imports = true +# NO `python_version` pin here, and that is a decision with evidence (#443). +# +# Pinning it to the floor was tried first, so that a 3.12-only annotation +# would fail at the keyboard rather than only in CI. It cannot be done +# cheaply: mypy then parses THIRD-PARTY source at 3.11 too, and on a 3.12+ +# interpreter the installed tifffile is 2026.5.15, which uses PEP 695. mypy +# dies on its source — "tifffile.py:929: Type statement is only supported in +# Python 3.12 and greater" — so every developer on 3.13 is blocked. +# +# The only escape is `follow_imports = "skip"` for tifffile, and that costs +# more than the pin is worth. tifffile ships py.typed, and `read_geotiff` is +# the single surface in this repository that calls into it. Measured both +# ways: with the skip, `page.asarray(maxworkerz=1)` type-checks CLEAN; without +# it, mypy says 'Unexpected keyword argument "maxworkerz" ... did you mean +# "maxworkers"?'. Skipping would have deleted checking of our own call site — +# the one that decodes every production raster — to gain a check CI already +# performs, since the typecheck job runs on the floor interpreter. +# +# So: mypy checks against whatever interpreter runs it, CI runs it on the +# floor, and ruff's target-version = "py311" catches floor-violating syntax +# locally. Do not add `python_version` back without re-running that drill. + # numpy's ndarray is generic but parameterising it everywhere is noisy # and deviates from community convention. disallow_any_generics = false + [tool.pytest.ini_options] testpaths = ["tests"] addopts = "-ra -q" diff --git a/reports/register_changelog.md b/reports/register_changelog.md index 30e295f..0c73e53 100644 --- a/reports/register_changelog.md +++ b/reports/register_changelog.md @@ -321,6 +321,84 @@ difference between it and everything else in this cluster. --- +## The Python floor, and a refutation that expired (2026-08-13) + +`#443` lowered `requires-python` from `>=3.12` to `>=3.11`. Two entries registered: **C-347** +(the required CI check decodes rasters with a different codec build than the server) and **C-348** +(nothing asserts the server's interpreter, and the wider floor now lets it choose a codec line). +ADR-030 amended rather than superseded — its tooling decision was never in question. + +**The lesson worth keeping is not about Python.** When `/code-review` ran on #430, one finder +flagged that `_locked_versions()` in `tests/test_dependency_floors.py` builds a dict keyed by +package name and would silently drop a duplicate. It was scored 25 and refuted, and the refutation +was *correct*: this project had a single `requires-python` and no environment markers, so +`uv.lock` could not contain two entries for one package. The changelog recorded it as such. + +#443 deleted that premise. Lowering the floor forks the lock — `tifffile` and `imagecodecs` each +resolve twice — and the collapse became live: the guard would have compared a floor against a +version it never read and reported success. In the file whose entire subject is mechanisms that +fail green. + +**A refutation is only as durable as its premise, and nothing was watching the premise.** Findings +are dismissed with a reason; the reason is a claim about the world; and claims about the world go +stale exactly like the documentation this register keeps catching. We have no mechanism that +re-examines a dismissal when its premise changes, and this is the second time in two weeks that a +"cannot happen here" turned into "happened here" (see also C-343, where three sources of truth +about the deployed version disagreed for five days). + +The practical consequence adopted here: the fix ships with a **fixture-based** parser test rather +than one asserting against the real `uv.lock`. A test that reads the live lock passes vacuously +whenever the lock has no duplicates — which is the state the original refutation described, and +which will recur the moment the floor rises again. + +**The fork bit within the hour, and only because both ends were run.** `python_version = "3.11"` +was added to mypy so the declared floor would be checked at the keyboard rather than only in CI. +That makes mypy parse *third-party* source at 3.11 too, and on a 3.12+ interpreter the installed +tifffile is 2026.5.15, which uses PEP 695 — so mypy died on **its** source: +`tifffile.py:929: Type statement is only supported in Python 3.12 and greater`. Under 3.11 the env +holds tifffile 2026.3.3, which predates PEP 695, so the identical command passed. A single-ended +check would have shipped a config that fails on every developer machine while CI stays green. + +**The first fix for that was worse than the problem, and review caught it.** Adding +`follow_imports = "skip"` for tifffile silenced the crash — and silently deleted type checking of +`read_geotiff`, the single surface in this repository that calls tifffile. Drilled both ways: +with the skip, `page.asarray(maxworkerz=1)` type-checks **clean**; without it, mypy says +*Unexpected keyword argument "maxworkerz" ... did you mean "maxworkers"?*. The comment justifying +the skip said "we type-check our code, not tifffile's" — but the loss was **in our code**, at the +call site that decodes every production raster. So `python_version` was removed instead: CI's +typecheck job runs on the floor anyway, and ruff's `target-version = "py311"` catches +floor-violating syntax locally. A convenience was traded away to keep a real check. + +**And the abandoned fix had a fails-green of its own on the way out.** The override table was first +written *inside* `[tool.mypy]`. A `[[tool.mypy.overrides]]` header ends the parent table, so +`disallow_any_generics = false` — written below it — silently became an override key instead of a +global one. mypy went from clean to **98 errors** in code nobody had touched. The TOML parsed +perfectly and meant something else; caught only because the error count was implausible. Same shape +as the duplicate `run:` key in #424, three weeks earlier: **a parse is not a verification.** + +**A third round, for the guard added against the second.** `/review-diff` then found that the new +`--python` pin check regexed the raw text of every workflow, so it reddened on a legitimate +`--python 3.13` inside `test-py313` — the one job whose purpose is being off-floor — and on a +version mentioned in a *comment*. Both reproduced by probe. A guard that goes red for reasons +unrelated to what it asserts is C-320, introduced into a change that cites C-320 three times. Now +parses YAML, exempts the off-floor job, and strips comments; re-drilled all three ways, with real +drift in `publish_package.yml` still failing and naming the job. **Not registered** — it is fixed, +and an entry saying "we sometimes write guards that false-positive" would have a perpetual trigger, +which is the entry class the #421 close-out was written against. + +**Two holes closed in passing, neither registered because neither stays open.** The parser +collapse above; and the absence of any LZW coverage. `imagecodecs` is imported by nothing under +`src/`, is reached only implicitly through `read_geotiff`'s `page.asarray()`, and decodes 100% of +production GHS-POP and GHS-BUILT-S rasters — yet **no test in this repository had ever written a +compressed TIFF on any interpreter**. Blocking the import and attempting an LZW write raises +`KeyError: " requires the 'imagecodecs' package"`; the uncompressed path that +every existing test used keeps working. So an import-graph audit would have called the dependency +removable, and removing it would have broken every production raster read while the suite stayed +green. That is the C-337 audit shape again: every step true, conclusion wrong, because the question +asked about imports rather than about what runs. + +--- + ## C-342 — the lockfile nobody can catch being stale (2026-08-08) `/register-risk` after `/code-review medium` on **#430**, the first story of epic #421. diff --git a/reports/technical_risk_register.md b/reports/technical_risk_register.md index af5b0a2..f6b7472 100644 --- a/reports/technical_risk_register.md +++ b/reports/technical_risk_register.md @@ -1,9 +1,9 @@ # Technical Risk Register **Date:** 2026-03-17 (updated 2026-07-27) -**Last update:** 2026-08-11 — C-341 RESOLVED and C-346 registered (#425): the version gate that could never fail was deleted rather than given a runner, replaced by a tag-vs-version test that does fail and an unskippable publish-time guard; four circular sibling copies are recorded rather than swept up. Full narrative history, including corrections and retractions, is in [`register_changelog.md`](register_changelog.md). Keep this line to one sentence: the header is an index, and the search-window guard (`test_falsification_merge_readiness.py`, 8000 chars) is what it protects. New narrative goes in the changelog, never here (#404). +**Last update:** 2026-08-13 — the Python floor dropped to `>=3.11` (#443/#444), registering C-347 (the required CI check decodes with a different codec build than the server), C-348 (nothing asserts the server's interpreter) and C-349 (a config value restated in prose has nothing binding it back). Full narrative history, including corrections and retractions, is in [`register_changelog.md`](register_changelog.md). Keep this line to one sentence: the header is an index, and the search-window guard (`test_falsification_merge_readiness.py`, 8000 chars) is what it protects. New narrative goes in the changelog, never here (#404). **Source:** 71 audits, reviews, and incidents — multi-expert engineering review, repo assimilation, falsification audits, test reviews, security sweeps, and production incidents. Full list in [`register_changelog.md`](register_changelog.md#where-the-findings-came-from). Add new sources there, not here (#404). -**Status:** 346 concern IDs assigned (C-28 merged into C-31, C-107 merged into C-60, C-183 merged into C-44, C-44 merged into C-164, C-03 merged into C-176): 304 resolved-or-demoted, 39 open concerns (0 Tier 1, 4 Tier 2, 10 Tier 3, 19 Tier 4, 6 deferred by design; 4 with fired trigger); 5 demoted to tech-debt backlog 2026-08-04, 8 open disagreements. 167 resolved concerns as full entries + 19 early-archive reference rows + 120 struck-through in active register (299 unique after dedup — 5 appear in both archive and active) + 32 resolved disagreements in archive. 42 disagreement IDs total: 34 resolved, 8 open. +**Status:** 349 concern IDs assigned (C-28 merged into C-31, C-107 merged into C-60, C-183 merged into C-44, C-44 merged into C-164, C-03 merged into C-176): 304 resolved-or-demoted, 42 open concerns (0 Tier 1, 4 Tier 2, 12 Tier 3, 20 Tier 4, 6 deferred by design; 4 with fired trigger); 5 demoted to tech-debt backlog 2026-08-04, 8 open disagreements. 167 resolved concerns as full entries + 19 early-archive reference rows + 120 struck-through in active register (299 unique after dedup — 5 appear in both archive and active) + 32 resolved disagreements in archive. 42 disagreement IDs total: 34 resolved, 8 open. **Archive:** Resolved concerns and disagreements are in `archive/technical_risk_register_resolved.md`. **Ranking criteria:** Impact if wrong x likelihood x detectability. Items marked **[DEFER]** are accepted risks or wait for a specific trigger condition. See ADR-020 for governance rationale. @@ -176,6 +176,9 @@ | ~~C-341~~ | ~~4~~ | ~~Deploy gates only run where someone types pytest — C-320's fix made them skip-with-reason in CI, so they assure only whoever runs the suite at the right moment | **When adding a deploy gate, or relying on one for release assurance:** ~~ | Resolved 2026-08-11 (#424 gave the answerable gates a scheduled runner; #425 deleted the one that could never answer and replaced it with a publish-time guard) | Test infra | | ~~C-342~~ | ~~3~~ | ~~A stale committed `uv.lock` is invisible — `uv sync` (ci.yml:24,42,60,99) rewrites it in place, so CI goes green on a lock that does not match the committed `pyproject.toml` and the stale one stays in git~~ | Resolved 2026-08-11 (#424): `uv lock --check` in the `test` job, before `uv sync`; drilled both directions and the ordering is itself guarded by `tests/test_ci_gates.py` | Dependency policy | | C-343 | 2 | Writing `~/.views-deploy-tag` is not deploying — the server ran v1.10.0 for five days while the tag file said v1.11.0 and views-frames stayed at the frozen 1.0.0. The in-script `git checkout` cannot fix the running script (bash has buffered it) and never runs `uv sync` | **At the next release** — deploy with all three `server_quickref.md` steps, then verify tag file, `git describe --tags` and installed version all agree | Deployment | +| C-347 | 3 | The required CI check exercises a different raster decoder than production — since the 3.11 floor the lock forks, so `test` decodes with `imagecodecs 2026.3.6` while the server uses `2026.5.10`. `test-py313` covers the production line but is **not a required check**, and a red nobody must satisfy is ignorable | **Before the next release tag, and whenever `tifffile` or `imagecodecs` moves in either fork** — confirm `test-py313` is green, and whether it has been added to the required lists on `main` and `development`. Resolved when it is required on both | Test infra | +| C-348 | 3 | Nothing asserts which Python the production server runs, and the floor now admits one that installs a **different raster line**. `preflight.py`, `check_health.py` and `refresh_pipeline.sh` contain no `sys.version_info` check of any kind. Created by #443 — this risk did not exist under `>=3.12` | **At the next server provisioning, Python upgrade on the Hetzner host, or any runbook edit that says `apt install python3`** — pin the interpreter explicitly and record which raster fork it resolves | Server hardening | +| C-349 | 4 | A config value restated in prose has nothing binding it back — `hetzner_deployment_guide.md` said "Install Python 3.10+" for the three months `pyproject.toml` declared `>=3.12`, an instruction producing an environment where the package could not install. The #444 pin guard binds *workflow* pins to `requires-python`; nothing binds *prose* | **When writing a Python version, or any pyproject value, into a guide or ADR** — link to the declaration instead of restating it, or accept that the copy will not be checked | Documentation drift | | C-333 | 4 | UCDP's custom auth header survives a cross-host redirect (`requests` strips only `Authorization`) — credential egress, not log leakage | **Before the next harvester auth review**, or if UCDP announces a host or redirect change — whichever is first | Credential hygiene | | ~~C-303~~ | ~~4~~ | ~~ADR-049 §Validation mandates 3 provenance counters; builder logs only 1~~ | Resolved 2026-06-28 (added `n_excluded_where_prec` and `n_passthrough_where_prec` to builder ledger entry) | ADR-049 provenance | | ~~C-304~~ | ~~4~~ | ~~ADR-049 §2 table says `adm_1` field lookup for where_prec 4/5; code uses pgid→gaul1 crosswalk~~ | Resolved 2026-06-28 (ADR-049 §2 table updated to document crosswalk approach) | ADR-049 documentation | @@ -3244,6 +3247,68 @@ Cross-ref: ~~C-341~~ (this was its last residue; resolved by the same PR), C-336 --- +### C-347: The required CI check decodes rasters with a different codec build than production + +**Source:** #443, lowering `requires-python` to `>=3.11` (2026-08-13). + +**Trigger:** **Before the next release tag, and whenever `tifffile` or `imagecodecs` moves in either fork.** Confirm `test-py313` is green, and confirm whether it has yet been added to the required-check lists. + +**Location:** `.github/workflows/ci.yml` (jobs `test` and `test-py313`); `uv.lock` (forked entries for `tifffile` and `imagecodecs`); `src/datafactory_viewpoint/raster_io.py` (`read_geotiff`). + +**What happens.** Since the floor dropped to 3.11 the lockfile is multi-version: 3.11 resolves `tifffile 2026.3.3` / `imagecodecs 2026.3.6`, and >=3.12 keeps `2026.5.15` / `2026.5.10`. The **required** `test` job pins the floor, so the codec build that CI blocks merges on is not the one decoding production GHS-POP and GHS-BUILT-S pixels. `test-py313` runs the production line but is deliberately **not required**: a required check that has never reported blocks every merge, so it must report first. + +**Why this is the fails-green shape and not merely a coverage note.** A check nobody must satisfy carries the same information as no check. It can go red on a Friday and be merged past on the same Friday, and nothing distinguishes that from green. The mitigation is not documentation — it is making it required. + +**Why a matrix is not the answer.** `strategy.matrix` renames the reported context to `test (3.11)`. Branch protection on both branches requires the bare name `test` with `enforce_admins: true`, so the required check would never report and every pull request would wait forever. Adding a separate job name is the only shape that does not deadlock. + +**Closure condition, stated so it cannot be quietly dropped:** resolved when `test-py313` appears in the required-status-check list on **both** `main` and `development`. That is a GitHub settings action, not a file edit, which is exactly why it is registered — a control whose enforcement lives outside the repository is weaker than one inside it. + +Cross-ref: C-348 (the server-side half of the same question), C-320 (a check that reddens for unrelated reasons stops being read; this is its mirror — a red that binds nothing). Part of the **mechanisms that fail green** cluster. GitHub: #443. + +--- + +### C-348: Nothing asserts which Python the production server runs — and the floor now admits one that installs a different raster line + +**Source:** #443 (2026-08-13). **Created by that change**; under `>=3.12` this risk did not exist. + +**Trigger:** **At the next server provisioning, the next Python upgrade on the Hetzner host, or any runbook edit that reintroduces `apt install python3`.** Pin the interpreter explicitly and record which raster fork it resolves. + +**Location:** `docs/guides/hetzner_deployment_guide.md` (§1.3); `scripts/refresh_pipeline.sh`, `scripts/preflight.py`, `scripts/check_health.py` — none contains a `sys.version_info` check. + +**What happens.** While the floor was `>=3.12`, a too-old interpreter on the host produced a loud failure: the package would not install. At `>=3.11` it installs on either, and the interpreter silently selects the codec build. On 3.11 the server would decode every production raster with `imagecodecs 2026.3.6`; on 3.12+ with `2026.5.10`. Nothing in the repository, the status page, or the provenance ledger records which. + +The deployment guide made this concrete: it said *"Install Python 3.10+"* for the three months the project declared `>=3.12` — an instruction that produced an uninstallable environment, and nothing noticed, because the guide and `pyproject.toml` were each internally consistent and never compared. Fixed in #443 by naming an explicit interpreter. + +**Tier 3, not 2.** No evidence of a wrong number today, and the two codec lines are two months apart on a mature library rather than a semantic rewrite. But it is a silent, unrecorded determinant of production numeric output, which is why it is not Tier 4. + +**Note for whoever closes this.** If it becomes a check, it must **skip with a reason** when run off-server rather than pass trivially (C-320). A test that quietly passes everywhere except the one machine it is about would be a new instance of the class it is meant to close. + +Cross-ref: C-347 (the CI-side half), C-343 (three sources of truth about the deployed version disagreeing, unnoticed for five days), ADR-030 amendment. GitHub: #443. + +--- + +### C-349: A config value restated in prose has nothing binding it back + +**Source:** `/code-review medium` on #444 (2026-08-13), as the *residual* of the guard added in that PR. + +**Trigger:** **When writing a Python version — or any `pyproject.toml` value — into a guide or ADR.** Link to the declaration rather than restating it; if you restate it, know that nothing will check the copy. + +**Location:** `docs/guides/hetzner_deployment_guide.md`; `docs/ADRs/030_raster_tooling.md`; `tests/test_ci_gates.py` (the guard that covers workflows and not prose). + +**What happened.** From 2026-05-18 to 2026-08-13 the deployment guide said *"Install Python 3.10+"* while `pyproject.toml` declared `>=3.12`. Following the guide produced an environment in which this package **could not be installed at all**. Neither document was wrong on its own terms; they were never compared, and nothing compared them. + +**Why this is registered rather than closed by #444.** That PR added `TestCiPinsTrackTheDeclaredFloor`, and the first draft of its docstring — and the PR body — claimed it would have caught this. **It would not.** Checked against `12d5afa`: CI pinned 3.12 and pyproject declared `>=3.12`, so the guard would have been **green** for the entire window. Only the prose disagreed. The claim was corrected in review; the gap it papered over is this entry. + +**Why the obvious instrument is wrong.** A test that greps docs for `Python 3.x` and compares to the floor would be a C-320 machine. Prose legitimately names other versions all over this repository — the ADR-030 amendment records that *"tifffile dropped 3.11 at 2026.4.11"*, the changelog records a drill run on `python3.10`, and historical entries describe the world as it was. A guard that cannot distinguish a stale instruction from an accurate history would redden constantly and stop being read. + +**So the mitigation is editorial, not mechanical:** in runbooks, point at `requires-python` instead of copying its value. `hetzner_deployment_guide.md` §1.3 now names an interpreter for a *different* reason — it selects the raster fork (C-348) — which is a restatement this entry would otherwise object to, and is accepted deliberately because that number must be pinned rather than derived. + +**Tier 4:** documentation quality, no correctness or reliability impact on outputs. It cost onboarding time and a broken instruction, both recoverable the moment anyone tried the command. + +Cross-ref: C-336 (the same family — docs true when written, false later; that entry is about *code* citations, this one about *config values*), C-348 (the server-interpreter question the guide's number now decides). GitHub: #444. + +--- + ## Deferred by Design ### C-10: Ontology vocabulary overhead diff --git a/tests/test_ci_gates.py b/tests/test_ci_gates.py index 2df3aad..f383332 100644 --- a/tests/test_ci_gates.py +++ b/tests/test_ci_gates.py @@ -28,6 +28,7 @@ from __future__ import annotations +import re from pathlib import Path from typing import Any @@ -36,6 +37,7 @@ REPO = Path(__file__).resolve().parents[1] CI = REPO / ".github" / "workflows" / "ci.yml" HYGIENE = REPO / ".github" / "workflows" / "release-topology.yml" +WORKFLOWS = REPO / ".github" / "workflows" def _steps(workflow: Path, job: str) -> list[dict[str, Any]]: @@ -126,3 +128,162 @@ def test_the_gates_get_a_token_and_the_ci_marker(self) -> None: "local branch, so it would otherwise claim coverage it does not " "have." ) + + +def _floor() -> str: + """The `>=` floor from requires-python — the single source of truth.""" + import tomllib + + requires = tomllib.loads((REPO / "pyproject.toml").read_text())["project"][ + "requires-python" + ] + assert requires.startswith(">="), ( + f"requires-python is {requires!r}; these guards assume a `>=` floor. " + f"If the form changed, update them rather than deleting them." + ) + return requires.removeprefix(">=").split(",")[0].strip() + + +def _python_pins(workflow: Path) -> dict[str, str]: + """job -> the `python-version` it hands setup-python, where it sets one. + + Any step whose `uses` mentions setup-python OR setup-uv counts: setup-uv + also accepts a `python-version` input, and publish_package.yml uses that + form. Reading only setup-python would leave the release build's pin + unguarded. + """ + data = yaml.safe_load(workflow.read_text()) + pins: dict[str, str] = {} + for job, spec in (data.get("jobs") or {}).items(): + for step in spec.get("steps") or []: + uses = step.get("uses") or "" + if "actions/setup-python" in uses or "setup-uv" in uses: + pin = (step.get("with") or {}).get("python-version") + if pin is not None: + pins[job] = str(pin) + return pins + + +class TestCiPinsTrackTheDeclaredFloor: + """Every workflow pin must equal the floor pyproject declares. + + **What this does NOT cover, stated because the first draft of this + docstring overclaimed it** (caught in review on #444): the drift that + actually happened between 2026-05-18 and 2026-08-13 was + `hetzner_deployment_guide.md` saying "Install Python 3.10+" while + pyproject said `>=3.12` — an instruction producing an environment where + the package could not be installed. This test would have been **green** + for that entire window, because CI's pins and pyproject agreed with each + other; only the prose disagreed. Verified against `12d5afa`. + + So: this binds workflow pins to `requires-python`. Nothing yet binds + prose to either. Do not cite this test as covering the guide. + """ + + # Jobs allowed to differ, each because it is deliberately NOT the floor. + # An allow-list rather than a derived rule: deriving ("every job with a + # setup-python step") would silently start excusing any future job that + # drifts, which is the failure this guard exists to prevent. + NOT_THE_FLOOR = {"test-py313"} + + def test_every_workflow_pin_equals_the_declared_floor(self) -> None: + wrong = {} + for wf in sorted(WORKFLOWS.glob("*.yml")): + for job, pin in _python_pins(wf).items(): + if job not in self.NOT_THE_FLOOR and pin != _floor(): + wrong[f"{wf.name}:{job}"] = pin + assert not wrong, ( + f"pyproject declares a floor of {_floor()}, but these workflow " + f"jobs pin something else: {wrong}. CI must exercise the weakest " + f"supported configuration — it is the one no developer runs " + f"locally. Change the pins, or change the floor deliberately and " + f"change them together.\n\n" + f"Scanning ALL workflows, not just ci.yml, because " + f"publish_package.yml builds the artefact that actually reaches " + f"consumers: a floor raised in pyproject and not there would " + f"build the release on an interpreter below requires-python." + ) + + def test_hardcoded_python_flags_match_the_floor(self) -> None: + """`uv run --python X` is a pin too, and setup-python cannot see it. + + Scans executable lines only. Comments are stripped first, and jobs in + ``NOT_THE_FLOOR`` are exempt — both because the first version of this + guard reddened on a comment mentioning an old version, and on the one + job whose whole purpose is running off the floor. A guard that goes + red for reasons unrelated to what it asserts stops being read, which + is C-320; it is not much use adding one of those to a change that + cites C-320 three times. + """ + pattern = re.compile(r"--python\s+(\d+\.\d+)") + wrong = [] + for wf in sorted(WORKFLOWS.glob("*.yml")): + for job, spec in ( + yaml.safe_load(wf.read_text()).get("jobs") or {} + ).items(): + if job in self.NOT_THE_FLOOR: + continue + for step in spec.get("steps") or []: + run = step.get("run") or "" + code = "\n".join( + ln for ln in run.splitlines() + if not ln.lstrip().startswith("#") + ) + for ver in set(pattern.findall(code)): + if ver != _floor(): + wrong.append(f"{wf.name}:{job}: --python {ver}") + assert not wrong, ( + f"Workflow steps pin an interpreter on the command line that is " + f"not the declared floor ({_floor()}): {wrong}. " + f"publish_package.yml's version guards use this form, so they are " + f"invisible to the setup-python check above — which is exactly how " + f"a pin drifts unnoticed." + ) + + +class TestSomethingTestsANonFloorInterpreter: + """The floor is not the only supported version, so it cannot be the only tested one. + + Since #443 the lockfile forks: 3.11 resolves an older tifffile and + imagecodecs than >=3.12 does, so the required `test` job decodes + rasters with a different codec build than the server. `test-py313` + is the only thing covering the production line. Delete it while + tidying and this test is what notices. + + Asserted as a property ("some job runs pytest on a non-floor + interpreter") rather than by name, so renaming the job is fine and + removing the coverage is not. + """ + + def test_a_job_runs_pytest_on_something_other_than_the_floor(self) -> None: + floor = _floor() + jobs = yaml.safe_load(CI.read_text())["jobs"] + + covering = [ + name + for name in jobs + if (pin := _python_pins(CI).get(name)) is not None + and pin != floor + # A BARE `uv run pytest` — the full suite. `import-enforcement` + # runs `pytest tests/test_import_enforcement.py -x -q`, so a + # substring match on "pytest" would let it satisfy this guard if + # its pin ever differed from the floor, and `test-py313` could + # then be deleted with the test still green. + and any( + re.search( + r"uv run (--frozen )?pytest\s*$", + (s.get("run") or "").strip(), + ) + for s in _steps(CI, name) + ) + ] + assert covering, ( + f"No ci.yml job runs pytest on an interpreter other than the " + f"declared floor ({floor}). The floor is not the only supported " + f"version — classifiers claim more — and since #443 the lock " + f"resolves a DIFFERENT raster stack above 3.11, so testing only " + f"the floor leaves the version the server actually runs " + f"unexercised. Restore a job like `test-py313`. Do NOT solve " + f"this with strategy.matrix: it renames the required `test` " + f"check and every PR then blocks forever." + ) diff --git a/tests/test_dependency_floors.py b/tests/test_dependency_floors.py index 0938ade..1c1347c 100644 --- a/tests/test_dependency_floors.py +++ b/tests/test_dependency_floors.py @@ -22,12 +22,39 @@ correct — see ``ALLOWED_AT_FLOOR``. But it is the observable trace of the freeze, and it is the only cheap one. +**A package can resolve MORE THAN ONCE.** Since the floor dropped to 3.11 +(#443) the lock forks: ``tifffile`` and ``imagecodecs`` each have two +entries, an older one for 3.11 and the current one for >=3.12, chosen by +marker. So the floor is compared against **every** resolution, and the +messages print all of them. + +That collapse used to be a real hole here. ``_locked_versions`` was a dict +comprehension keyed by name, which silently kept whichever entry ``uv`` +serialised last and reported success about a version it never read — in +the file whose entire subject is mechanisms that fail green. It was raised +during ``/code-review`` on #430, scored 25, and **correctly refuted**: see +``register_changelog.md``, *"a dict-collision path that this project's +single ``requires-python`` and marker-free dependencies cannot reach."* +#443 deleted that premise. **A refutation is only as durable as its +premise, and nothing was watching the premise.** + +**Strict, not lenient.** A package is flagged when *any* resolution equals +the floor, not only when the highest does. Lenient (``max == floor``) is +quieter and structurally blind to one fork freezing while its sibling +moves — which is exactly what ``uv lock``'s keep-the-existing-pin +behaviour produces, per fork. Under lenient, a new fork appearing would +silently widen what this guard tolerates, with no diff to review. The +cost of strict is an occasional flag on a legitimate upstream ceiling, and +that is not a cost: ``ALLOWED_AT_FLOOR`` already demands a written reason +and ``test_allow_list_has_not_rotted`` already expires it. + **Scope: ``[project].dependencies`` only.** The dev group and the ``[pandas]`` extra resolve through the same lockfile and can freeze the same way, but a frozen dev tool does not reach consumers, and a frozen -extra cannot (``pandas>=2.0`` is uncapped and unfrozen). Both were checked -by hand on 2026-08-08 and neither is at its floor. Widen this if that -stops being true. +extra cannot (``pandas>=2.0`` is uncapped and unfrozen). Re-checked by +hand on 2026-08-13 against the **forked** lock — the earlier check was run +before the fork existed, so it was a claim about a different world. Both +still clear. Widen this if that stops being true. ``packaging`` is imported for version comparison; hand-rolling it would get ``2.3`` vs ``2.3.0`` wrong. It is not declared anywhere in this @@ -119,14 +146,33 @@ def _declared_floors() -> dict[str, str]: return floors -def _locked_versions() -> dict[str, str]: - """Every package in ``uv.lock``, canonicalised, with the chosen version.""" - lock = tomllib.loads((REPO / "uv.lock").read_text()) - return { - canonicalize_name(pkg["name"]): pkg["version"] - for pkg in lock["package"] - if "version" in pkg - } +def _parse_locked_versions(lock_text: str) -> dict[str, list[Version]]: + """Canonical package name -> **every** version the lock resolves for it. + + A list, and the list is the entire point: ``uv`` writes one + ``[[package]]`` block per marker environment, so a forked package + appears more than once. Taking a dict comprehension here discards all + but one and reports on a version nobody read. + + Split from :func:`_locked_versions` so the parser has a seam and can + be tested against a fixture rather than against whatever ``uv.lock`` + happens to contain today — see ``TestTheLockParserSeesEveryFork``. + """ + lock = tomllib.loads(lock_text) + versions: dict[str, list[Version]] = {} + for pkg in lock["package"]: + if "version" in pkg: + key = canonicalize_name(pkg["name"]) + versions.setdefault(key, []).append(Version(pkg["version"])) + return versions + + +def _locked_versions() -> dict[str, list[Version]]: + return _parse_locked_versions((REPO / "uv.lock").read_text()) + + +def _show(versions: list[Version]) -> str: + return ", ".join(str(v) for v in sorted(versions)) _FIX_HINT = ( @@ -141,24 +187,29 @@ def test_no_dependency_is_pinned_at_its_floor(self) -> None: locked = _locked_versions() allowed = {canonicalize_name(n) for n in ALLOWED_AT_FLOOR} stuck = { - name: floor + name: f"floor {floor}, resolved {_show(locked[name])}" for name, floor in _declared_floors().items() if name not in allowed and name in locked - and Version(locked[name]) == Version(floor) + and any(v == Version(floor) for v in locked[name]) } assert not stuck, ( - "These runtime dependencies are locked at exactly the floor " - f"pyproject declares: {sorted(stuck)}. " + "These runtime dependencies have a resolution sitting at exactly " + f"the floor pyproject declares: {stuck}. " "Sitting on the floor is a SYMPTOM, not the bug — the bug is " "that `uv lock` keeps an existing pin while it still satisfies " "the constraint, so a loose floor freezes the version instead " "of merely permitting it, and no routine action moves it. " "Six weeks of views-frames 1.0.0 looked exactly like this " - "(C-337). " + "(C-337). Every resolution is listed above BECAUSE that is the " + "judgement you have to make: a package can be at its floor in " + "one marker environment and current in another, which is an " + "upstream ceiling and fine, or frozen in all of them, which is " + "not. " + " ".join(_FIX_HINT.format(name=n) for n in sorted(stuck)) + " If the pin is correct — typically because the floor is the " - "latest release — add the package to ALLOWED_AT_FLOOR in this " + "latest release, or because upstream dropped the interpreter " + "that fork serves — add the package to ALLOWED_AT_FLOOR in this " "file WITH THE REASON, not just the name." ) @@ -173,10 +224,11 @@ def test_allow_list_has_not_rotted(self) -> None: obsolete.append(f"{raw} (no longer a runtime dependency)") elif name not in locked: obsolete.append(f"{raw} (not in uv.lock)") - elif Version(locked[name]) != Version(floors[name]): + elif not any(v == Version(floors[name]) for v in locked[name]): obsolete.append( - f"{raw} (floor {floors[name]}, locked {locked[name]} — " - f"it has moved off the floor)" + f"{raw} (floor {floors[name]}, resolved " + f"{_show(locked[name])} — no resolution is on the floor " + f"any more)" ) assert not obsolete, ( f"ALLOWED_AT_FLOOR entries that no longer apply: {obsolete}. " @@ -185,3 +237,47 @@ def test_allow_list_has_not_rotted(self) -> None: "do so silently — which is the failure class this file exists " "to catch." ) + + +class TestTheLockParserSeesEveryFork: + """The parser, drilled against a fixture rather than the real lock. + + Deliberately NOT written as "the number of parsed versions equals the + number of `[[package]]` blocks in uv.lock" — that assertion is + unfailable whenever the lock happens to have no duplicates, which is + the green-tick-that-checks-nothing standard this file deletes other + guards for. A fixture with a known fork can always fail. + """ + + _FORKED = """ +version = 1 + +[[package]] +name = "tifffile" +version = "2026.3.3" + +[[package]] +name = "tifffile" +version = "2026.5.15" + +[[package]] +name = "Some_Other-Pkg" +version = "1.2.3" +""" + + def test_both_entries_for_one_name_are_returned(self) -> None: + parsed = _parse_locked_versions(self._FORKED) + assert parsed["tifffile"] == [ + Version("2026.3.3"), + Version("2026.5.15"), + ], ( + "The parser dropped a fork. A dict keyed by package name keeps " + "only the last entry, so the guard would compare the floor " + "against a version it never read and report success. That is " + "the exact collapse #443 exposed when the 3.11 floor made " + "uv.lock multi-version." + ) + + def test_names_are_canonicalised(self) -> None: + parsed = _parse_locked_versions(self._FORKED) + assert "some-other-pkg" in parsed, sorted(parsed) diff --git a/tests/test_raster_io.py b/tests/test_raster_io.py index f4ec9ee..6d408be 100644 --- a/tests/test_raster_io.py +++ b/tests/test_raster_io.py @@ -38,3 +38,54 @@ def test_read_geotiff_returns_tuple(tmp_path: Path) -> None: assert ry == pytest.approx(tie_y) assert rsx == pytest.approx(sc_x) assert rsy == pytest.approx(sc_y) + + +def test_read_geotiff_reads_an_lzw_compressed_file(tmp_path: Path) -> None: + """The compression production actually uses — decoded by imagecodecs. + + Every GHS-POP and GHS-BUILT-S GeoTIFF JRC publishes is LZW-compressed + (``docs/sources/ghspop.md``, ``docs/sources/ghsbuilts.md``). Until this + test was added on 2026-08-13 (#443), **nothing in this suite ever wrote + a compressed TIFF** — every ``imwrite`` above and in the viewpoint + tests is uncompressed. So the decode path that handles 100% of + production rasters had never been exercised on any interpreter. + + Why that is worse than an ordinary coverage gap: ``imagecodecs`` is + imported by **nothing** in ``src/``. It is reached implicitly, inside + ``read_geotiff``, when ``page.asarray()`` hits COMPRESSION 5 and + tifffile dispatches to ``imagecodecs.lzw_decode``. There is no + pure-Python fallback for LZW. An import-graph audit therefore concludes + the dependency is unused and removable — and removing it would break + every production raster read while leaving the whole suite green. That + is the exact shape of the audit that got the views-frames floor wrong + (C-337): every step true, conclusion wrong, because the question was + about imports rather than about what actually runs. + + Kept as a separate function rather than parametrising the test above: + WET before DRY, and the two tests answer different questions. + """ + data = np.arange(16, dtype=np.float32).reshape(4, 4) + tif_path = tmp_path / "lzw.tif" + + tie_x, tie_y = -180.0, 90.0 + sc_x, sc_y = 0.00833333, 0.00833333 + + tifffile.imwrite( + str(tif_path), + data, + compression="lzw", + metadata=None, + extratags=[ + (33922, 12, 6, (0.0, 0.0, 0.0, tie_x, tie_y, 0.0)), + (33550, 12, 3, (sc_x, sc_y, 0.0)), + ], + ) + + arr, rx, ry, rsx, rsy = read_geotiff(tif_path) + + np.testing.assert_array_equal(arr, data) + assert arr.dtype == np.float32 + assert rx == pytest.approx(tie_x) + assert ry == pytest.approx(tie_y) + assert rsx == pytest.approx(sc_x) + assert rsy == pytest.approx(sc_y) diff --git a/uv.lock 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