Use this issue to collect datasets used by course attendees.
This info might be useful for new datasets we use in future iterations.
Jun 2026 workshop:
| Technology |
Species |
Tissue |
| Xenium |
Medicago |
Roots, nodule |
| Xenium |
Human |
Lung |
| Xenium / Visium |
Human |
Cervical cancer |
| Mixed |
Human |
Brain, breast |
| Xenium / Stereo-seq |
Human / mouse |
Liver |
| Visium |
Mouse |
Brain |
| Visium |
Mouse |
Brain |
| Xenium |
Human |
Placenta |
| GeoMx |
Human |
Prostate |
| Xenium / Visium HD |
Human |
Brain |
| Visium / Xenium |
Mouse |
Liver |
| Xenium |
Mouse |
Subcutaneous tumour, lymph node, CRC, liver metastases |
| Xenium, Akoya, IMC |
Human |
Coronary artery |
Use this issue to collect datasets used by course attendees.
This info might be useful for new datasets we use in future iterations.
Jun 2026 workshop: