Skip to content

Discrepancy between paper and code in pearson_delta #230

@marvinsxtr

Description

@marvinsxtr

Hey, thank you for this great evaluation package.

I noticed in the STATE paper on page 35, the Pearson Delta uses the absolute difference while the implementation uses the raw value (abs=False, see https://github.com/ArcInstitute/cell-eval/blob/main/src/cell_eval/metrics/_anndata.py#L211 and https://github.com/ArcInstitute/cell-eval/blob/main/src/cell_eval/metrics/_anndata.py#L31)

Is this intended? Maybe I missed something.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type
    No fields configured for issues without a type.

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions